Rhenium in PDB 3lya: Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6

The structure of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6, PDB code: 3lya was solved by A.Eichinger, A.Skerra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	69.77 / 2.30
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	80.561, 80.561, 199.783, 90.00, 90.00, 120.00
R / Rfree (%)	23 / 27.1

The structure of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 also contains other interesting chemical elements:

Chlorine

(Cl)

96 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Rhenium atom in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 (pdb code 3lya). This binding sites where shown within 5.0 Angstroms radius around Rhenium atom.
In total 16 binding sites of Rhenium where determined in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6, PDB code: 3lya:
Jump to Rhenium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Rhenium binding site 1 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 1 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re1 b:13.1 occ:1.00 RE A:RHE1 0.0 13.1 1.0 CL2 A:RHE1 2.3 20.1 1.0 CL3 A:RHE1 2.3 21.1 1.0 CL4 A:RHE1 2.3 23.7 1.0 CL6 A:RHE1 2.3 25.3 1.0 CL1 A:RHE1 2.3 27.1 1.0 CL5 A:RHE1 2.3 23.4 1.0 CG A:GLU371 4.0 28.0 1.0 NH1 A:ARG333 4.3 20.4 1.0 N A:HIS332 4.5 15.7 1.0 CD A:ARG333 4.7 23.1 1.0 OE2 A:GLU371 4.8 34.9 1.0 CD A:GLU371 4.8 32.0 1.0 ND1 A:HIS332 4.9 19.8 1.0

Rhenium binding site 2 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 2 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re2 b:11.0 occ:1.00 RE A:RHE2 0.0 11.0 1.0 CL1 A:RHE2 2.3 16.7 1.0 CL3 A:RHE2 2.3 19.5 1.0 CL4 A:RHE2 2.3 18.4 1.0 CL5 A:RHE2 2.3 18.9 1.0 CL2 A:RHE2 2.3 18.5 1.0 CL6 A:RHE2 2.4 20.2 1.0 CG A:GLU360 4.8 16.1 1.0 CB A:GLU360 4.9 14.6 1.0

Rhenium binding site 3 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 3 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re3 b:29.4 occ:1.00 RE A:RHE3 0.0 29.4 1.0 O A:HOH34 1.9 4.7 1.0 CL5 A:RHE3 2.3 33.8 1.0 CL4 A:RHE3 2.3 32.0 1.0 CL1 A:RHE3 2.4 29.5 1.0 CL3 A:RHE3 2.4 35.6 1.0 CL2 A:RHE3 2.4 40.4 1.0 CL6 A:RHE3 2.5 34.5 1.0 CE1 A:HIS344 4.1 18.3 1.0 NE1 A:TRP450 4.2 14.7 1.0 OG1 A:THR229 4.2 17.6 1.0 CD1 A:TRP450 4.6 14.6 1.0 CB A:SER449 4.6 14.1 1.0 CB A:ASP225 4.8 11.4 1.0 ND1 A:HIS344 4.9 15.2 1.0 CB A:THR229 5.0 14.0 1.0

Rhenium binding site 4 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 4 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re4 b:28.5 occ:0.50 RE A:RHE4 0.0 28.5 0.5 CL2 A:RHE4 2.4 36.2 0.5 CL4 A:RHE4 2.4 35.9 0.5 CL5 A:RHE4 2.4 31.2 0.5 CL3 A:RHE4 2.4 38.4 0.5 CL1 A:RHE4 2.4 34.4 0.5 CL6 A:RHE4 2.4 32.2 0.5 NH2 A:ARG386 3.9 30.7 1.0 O A:HOH515 4.3 36.1 0.5 NE2 A:GLN396 4.3 25.6 1.0 NE2 A:HIS390 4.8 22.9 1.0 CE1 A:HIS390 5.0 22.4 1.0

Rhenium binding site 5 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 5 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re5 b:31.0 occ:0.50 RE A:RHE5 0.0 31.0 0.5 CL4 A:RHE5 2.4 38.1 0.5 CL1 A:RHE5 2.4 38.2 0.5 CL2 A:RHE5 2.4 37.6 0.5 CL3 A:RHE5 2.4 38.3 0.5 CL6 A:RHE5 2.4 36.7 0.5 CL5 A:RHE5 2.4 36.3 0.5 CB A:ALA399 4.7 28.1 1.0 CG A:GLN396 5.0 26.5 1.0

Rhenium binding site 6 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 6 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re6 b:49.4 occ:1.00 RE A:RHE6 0.0 49.4 1.0 CL4 A:RHE6 2.4 55.2 1.0 CL2 A:RHE6 2.4 56.1 1.0 CL5 A:RHE6 2.4 52.9 1.0 CL6 A:RHE6 2.4 60.4 1.0 CL1 A:RHE6 2.4 56.1 1.0 CL3 A:RHE6 2.4 56.7 1.0 CD A:LYS379 4.4 18.8 1.0 CG1 A:VAL366 4.6 18.2 1.0 CE A:LYS379 4.8 20.7 1.0 NZ A:LYS379 4.8 24.2 1.0

Rhenium binding site 7 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 7 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re7 b:56.2 occ:1.00 RE A:RHE7 0.0 56.2 1.0 CL1 A:RHE7 2.3 56.1 1.0 CL4 A:RHE7 2.4 62.3 1.0 CL5 A:RHE7 2.4 60.4 1.0 CL3 A:RHE7 2.4 62.3 1.0 CL2 A:RHE7 2.4 60.9 1.0 CL6 A:RHE7 2.4 59.1 1.0 N A:ALA483 4.6 13.4 1.0 CA A:GLY482 4.7 13.6 1.0 C A:GLY482 4.8 13.9 1.0 CE1 A:TYR245 4.9 23.7 1.0

Rhenium binding site 8 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 8 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re8 b:39.0 occ:0.50 RE A:RHE8 0.0 39.0 0.5 CL3 A:RHE8 2.3 44.0 0.5 CL1 A:RHE8 2.4 40.7 0.5 CL2 A:RHE8 2.4 44.6 0.5 CL5 A:RHE8 2.4 44.3 0.5 CL6 A:RHE8 2.4 36.6 0.5 CL4 A:RHE8 2.4 41.6 0.5 CB A:ASP352 4.9 17.5 1.0 OD2 A:ASP352 5.0 17.1 0.0

Rhenium binding site 9 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 9 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re9 b:44.9 occ:0.75 RE A:RHE9 0.0 44.9 0.8 CL3 A:RHE9 2.3 56.6 0.8 CL5 A:RHE9 2.4 57.6 0.8 CL6 A:RHE9 2.4 61.4 0.8 CL4 A:RHE9 2.4 61.5 0.8 CL2 A:RHE9 2.4 58.2 0.8 CL1 A:RHE9 2.4 60.9 0.8 CD A:PRO503 3.9 18.3 1.0 CB A:TYR504 4.0 22.2 1.0 N A:TYR504 4.1 21.4 1.0 CB A:ALA470 4.1 13.0 1.0 CG A:PRO503 4.2 18.3 1.0 N A:PRO503 4.4 18.7 1.0 CA A:VAL502 4.6 18.6 1.0 C A:VAL502 4.7 18.0 1.0 CA A:TYR504 4.7 21.6 1.0 O A:VAL501 4.8 18.3 1.0

Rhenium binding site 10 out of 16 in the Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6


Mono view


Stereo pair view

A full contact list of Rhenium with other atoms in the Re binding site number 10 of Crystal Structure of the Periplasmic Domain of Cadc in the Presence of K2RECL6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Re10 b:32.0 occ:0.50 RE A:RHE10 0.0 32.0 0.5 CL5 A:RHE10 2.4 30.1 0.5 CL3 A:RHE10 2.4 31.8 0.5 CL6 A:RHE10 2.4 36.0 0.5 CL2 A:RHE10 2.4 33.4 0.5 CL4 A:RHE10 2.4 36.3 0.5 CL1 A:RHE10 2.4 29.7 0.5 O A:HOH33 4.0 33.4 1.0 NE2 A:GLN495 4.3 18.1 0.0 CG A:GLN495 4.7 19.2 1.0 CD A:GLN495 5.0 18.0 0.0

A.Eichinger, I.Haneburger, C.Koller, K.Jung, A.Skerra. Crystal Structure of the Sensory Domain of Escherichia Coli Cadc, A Member of the Toxr-Like Protein Family. Protein Sci. V. 20 656 2011.
ISSN: ISSN 0961-8368
PubMed: 21308846
DOI: 10.1002/PRO.594